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1

Modelling Vector Transmission and Epidemiology of Co-Infecting Plant Viruses

Allen, Linda J. S., Bokil, Vrushali A., Cunniffe, Nik J., Hamelin, Frédéric M., Hilker, Frank M., Jeger, Michael J.

Journal:

Year:

2019

Language:

english

File:

PDF, 2.65 MB

english, 2019

2

Thirteen challenges in modelling plant diseases

Cunniffe, Nik J., Koskella, Britt, E. Metcalf, C. Jessica, Parnell, Stephen, Gottwald, Tim R., Gilligan, Christopher A.

Journal:

Year:

2015

Language:

english

File:

PDF, 415 KB

english, 2015

3

Scaling from mycelial growth to infection dynamics: a reaction diffusion approach

Nik J. Cunniffe, Christopher A. Gilligan

Journal:

Year:

2008

Language:

english

File:

PDF, 542 KB

english, 2008

4

Cruel and Unusual Punishment? An Analysis of Point Deduction in European Association Football Leagues

Cunniffe, Nik J, Cook, Alex R

Journal:

Journal of Quantitative Analysis in Sports

Year:

2009

Language:

english

File:

PDF, 394 KB

english, 2009

5

Using epidemiological principles to explain fungicide resistance management tactics: why do mixtures outperform alternations?

Elderfield, James A, Lopez Ruiz, Fran, van den Bosch, Frank, Cunniffe, Nik J

Journal:

Year:

2018

Language:

english

File:

PDF, 4.00 MB

english, 2018

6

Cucumber mosaic virus 2b proteins inhibit virus‐induced aphid resistance in tobacco

Tungadi, Trisna, Donnelly, Ruairí, Qing, Ling, Iqbal, Javaid, Murphy, Alex M., Pate, Adrienne E., Cunniffe, Nik J., Carr, John P.

Journal:

Molecular Plant Pathology

Year:

2019

Language:

english

File:

PDF, 382 KB

english, 2019

7

Cucumber mosaic virus 2b proteins inhibit virus‐induced aphid resistance in tobacco

Tungadi, Trisna, Donnelly, Ruairí, Qing, Ling, Iqbal, Javaid, Murphy, Alex M., Pate, Adrienne E., Cunniffe, Nik J., Carr, John P.

Journal:

Molecular Plant Pathology

Year:

2019

File:

PDF, 382 KB

2019

8

Key questions for modelling COVID-19 exit strategies

Thompson, Robin N., Hollingsworth, T. DÃ©irdre, Isham, Valerie, Arribas-Bel, Daniel, Ashby, Ben, Britton, Tom, Challenor, Peter, Chappell, Lauren H. K., Clapham, Hannah, Cunniffe, Nik J., Dawid, A. Ph

Journal:

Proceedings Biological Sciences

Year:

2020

File:

PDF, 516 KB

2020

9

Predicting the economic costs and property value losses attributed to sudden oak death damage in California (2010–2020)

Kent Kovacs, Tomáš Václavík, Robert G. Haight, Arwin Pang, Nik J. Cunniffe, Christopher A. Gilligan, Ross K. Meentemeyer

Journal:

Journal of Environmental Management

Year:

2011

Language:

english

File:

PDF, 736 KB

english, 2011

10

A theoretical framework for biological control of soil-borne plant pathogens: Identifying effective strategies

Nik J. Cunniffe, Christopher A. Gilligan

Journal:

Journal of Theoretical Biology

Year:

2011

Language:

english

File:

PDF, 1.14 MB

english, 2011

11

Epidemiological modeling of invasion in heterogeneous landscapes: spread of sudden oak death in California (1990–2030)

Meentemeyer, Ross K., Cunniffe, Nik J., Cook, Alex R., Filipe, Joao A. N., Hunter, Richard D., Rizzo, David M., Gilligan, Christopher A.

Journal:

Year:

2011

Language:

english

File:

PDF, 7.05 MB

english, 2011

12

FUTURES: Multilevel Simulations of Emerging Urban–Rural Landscape Structure Using a Stochastic Patch-Growing Algorithm

Meentemeyer, Ross K., Tang, Wenwu, Dorning, Monica A., Vogler, John B., Cunniffe, Nik J., Shoemaker, Douglas A.

Journal:

Annals of the Association of American Geographers

Year:

2013

Language:

english

File:

PDF, 2.06 MB

english, 2013

13

Optimising and Communicating Options for the Control of Invasive Plant Disease When There Is Epidemiological Uncertainty

Cunniffe, Nik J., Stutt, Richard O. J. H., DeSimone, R. Erik, Gottwald, Tim R., Gilligan, Christopher A., Tanaka, Mark M.

Journal:

PLoS Computational Biology

Year:

2015

Language:

english

File:

PDF, 1.76 MB

english, 2015

14

Cost-Effective Control of Plant Disease When Epidemiological Knowledge Is Incomplete: Modelling Bahia Bark Scaling of Citrus

Cunniffe, Nik J., Laranjeira, Francisco F., Neri, Franco M., DeSimone, R. Erik, Gilligan, Christopher A., Salathé, Marcel

Journal:

PLoS Computational Biology

Year:

2014

Language:

english

File:

PDF, 3.58 MB

english, 2014

15

Management of invading pathogens should be informed by epidemiology rather than administrative boundaries

Thompson, Robin N., Cobb, Richard C., Gilligan, Christopher A., Cunniffe, Nik J.

Journal:

Ecological Modelling

Year:

2016

Language:

english

File:

PDF, 1.20 MB

english, 2016

16

Modeling when, where, and how to manage a forest epidemic, motivated by sudden oak death in California

Cunniffe, Nik J., Cobb, Richard C., Meentemeyer, Ross K., Rizzo, David M., Gilligan, Christopher A.

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 1.87 MB

english, 2016

17

Trade-off between disease resistance and crop yield: a landscape-scale mathematical modelling perspective

Vyska, Martin, Cunniffe, Nik, Gilligan, Christopher

Journal:

Journal of The Royal Society Interface

Year:

2016

Language:

english

File:

PDF, 863 KB

english, 2016

18

[ACM Press the 25th International Symposium - Saarbrücken, Germany (2016.07.18-2016.07.20)] Proceedings of the 25th International Symposium on Software Testing and Analysis - ISSTA 2016 - Testing stochastic software using pseudo-oracles

Patrick, Matthew, Craig, Andrew P., Cunniffe, Nik J., Parry, Matthew, Gilligan, Christopher A.

Year:

2016

Language:

english

File:

PDF, 842 KB

english, 2016

19

Regional Growth Rate Differences Specified by Apical Notch Activities Regulate Liverwort Thallus Shape

Solly, Jeremy E., Cunniffe, Nik J., Harrison, C. Jill

Journal:

Current Biology

Year:

2017

Language:

english

File:

PDF, 3.96 MB

english, 2017

20

Risk-based management of invading plant disease

Hyatt-Twynam, Samuel R., Parnell, Stephen, Stutt, Richard O. J. H., Gottwald, Tim R., Gilligan, Christopher A., Cunniffe, Nik J.

Journal:

New Phytologist

Year:

2017

Language:

english

File:

PDF, 2.06 MB

english, 2017

21

Evidence-based controls for epidemics using spatio-temporal stochastic models in a Bayesian framework

Adrakey, Hola K., Streftaris, George, Cunniffe, Nik J., Gottwald, Tim R., Gilligan, Christopher A., Gibson, Gavin J.

Journal:

Journal of The Royal Society Interface

Year:

2017

Language:

english

File:

PDF, 2.37 MB

english, 2017

22

Grower and regulator conflict in management of the citrus disease Huanglongbing in Brazil: a modelling study

Craig, Andrew P., Cunniffe, Nik J., Parry, Matthew, Laranjeira, Francisco F., Gilligan, Christopher A.

Journal:

Journal of Applied Ecology

Year:

2018

Language:

english

File:

PDF, 1.48 MB

english, 2018

23

Detecting Presymptomatic Infection Is Necessary to Forecast Major Epidemics in the Earliest Stages of Infectious Disease Outbreaks

Thompson, Robin N., Gilligan, Christopher A., Cunniffe, Nik J., Salathé, Marcel

Journal:

PLoS Computational Biology

Year:

2016

Language:

english

File:

PDF, 2.17 MB

english, 2016

24

Virus Infection of Plants Alters Pollinator Preference: A Payback for Susceptible Hosts?

Groen, Simon C., Jiang, Sanjie, Murphy, Alex M., Cunniffe, Nik J., Westwood, Jack H., Davey, Matthew P., Bruce, Toby J. A., Caulfield, John C., Furzer, Oliver J., Reed, Alison, Robinson, Sophie I., Mi

Journal:

Year:

2016

Language:

english

File:

PDF, 4.01 MB

english, 2016

25

Pyrenoid loss in Chlamydomonas reinhardtii causes limitations in CO2 supply, but not thylakoid operating efficiency

Caspari, Oliver D, Meyer, Moritz T, Tolleter, Dimitri, Wittkopp, Tyler M, Cunniffe, Nik J, Lawson, Tracy, Grossman, Arthur R, Griffiths, Howard

Journal:

Journal of Experimental Botany

Year:

2017

Language:

english

File:

PDF, 2.57 MB

english, 2017

26

Coinfections by noninteracting pathogens are not independent and require new tests of interaction

Hamelin, Frédéric M., Allen, Linda J. S., Bokil, Vrushali A., Gross, Louis J., Hilker, Frank M., Jeger, Michael J., Manore, Carrie A., Power, Alison G., Rúa, Megan A., Cunniffe, Nik J., Kucharski, Ada

Journal:

Year:

2019

File:

PDF, 1.75 MB

2019

27

Modelling Vector Transmission and Epidemiology of Co-Infecting Plant Viruses

Allen, Linda J. S., Bokil, Vrushali A., Cunniffe, Nik J., Hamelin, Frédéric M., Hilker, Frank M., Jeger, Michael J.

Journal:

Year:

2019

File:

PDF, 2.65 MB

2019

28

When does spatial diversification usefully maximise the durability of crop disease resistance?

Watkinson-Powell, Benjamin, Gilligan, Christopher, Cunniffe, Nik J

Journal:

Year:

2020

File:

PDF, 1.55 MB

2020

29

Small scale variability in soil moisture drives infection of vulnerable juniper populations by invasive forest pathogen

Donald, Flora, Green, Sarah, Searle, Kate, Cunniffe, Nik J., Purse, Bethan V.

Journal:

Forest Ecology and Management

Year:

2020

File:

PDF, 2.57 MB

2020

30

Three Aphid-Transmitted Viruses Encourage Vector Migration From Infected Common Bean (Phaseolus vulgaris) Plants Through a Combination of Volatile and Surface Cues

Wamonje, Francis O., Tungadi, Trisna D., Murphy, Alex M., Pate, Adrienne E., Woodcock, Christine, Caulfield, John C., Mutuku, J. Musembi, Cunniffe, Nik J., Bruce, Toby J. A., Gilligan, Christopher A.,

Journal:

Frontiers in Plant Science

Year:

2020

File:

PDF, 913 KB

2020